A modular tool to aggregate results from bioinformatics analyses across many samples into a single report.
Report
generated on 2024-07-30, 00:55 EEST
based on data in:
/wrk-vakka/users/nikiarte/rnaseq_analysis/snakemake/featureCounts
General Statistics
Showing 69/69 rows and 2/2 columns.
| Sample Name | % Assigned | M Assigned |
|---|---|---|
| SRR14240730 | 30.8% | 72.4M |
| SRR14240731 | 36.4% | 93.7M |
| SRR14240732 | 39.0% | 77.8M |
| SRR14240733 | 37.2% | 59.8M |
| SRR14240734 | 36.3% | 130.0M |
| SRR14240735 | 31.0% | 118.7M |
| SRR14240736 | 34.2% | 94.3M |
| SRR14240737 | 33.8% | 106.5M |
| SRR14240738 | 32.8% | 94.9M |
| SRR14240739 | 32.1% | 84.5M |
| SRR14240740 | 23.0% | 77.6M |
| SRR14240741 | 35.6% | 79.0M |
| SRR14240742 | 35.5% | 33.9M |
| SRR14240743 | 27.4% | 56.2M |
| SRR14240744 | 30.0% | 93.2M |
| SRR14240745 | 30.0% | 62.3M |
| SRR14240746 | 28.3% | 87.9M |
| SRR14240747 | 38.0% | 66.8M |
| SRR14240748 | 32.9% | 86.9M |
| SRR14240749 | 35.2% | 83.8M |
| SRR14240750 | 30.4% | 70.7M |
| SRR14240751 | 31.0% | 65.5M |
| SRR14240752 | 34.5% | 62.9M |
| SRR14240753 | 36.3% | 85.0M |
| SRR14240754 | 31.0% | 53.9M |
| SRR14240755 | 33.1% | 74.0M |
| SRR14240756 | 34.6% | 51.1M |
| SRR14240757 | 32.7% | 79.0M |
| SRR14240758 | 42.5% | 55.9M |
| SRR14240759 | 29.7% | 36.4M |
| SRR14240760 | 38.1% | 103.2M |
| SRR14240761 | 35.7% | 69.3M |
| SRR14240762 | 38.1% | 144.3M |
| SRR14240763 | 33.6% | 57.7M |
| SRR14240764 | 36.3% | 75.5M |
| SRR14240765 | 35.0% | 111.0M |
| SRR14240766 | 31.6% | 73.2M |
| SRR14240767 | 34.4% | 71.5M |
| SRR14240768 | 29.8% | 49.8M |
| SRR14240769 | 31.3% | 95.2M |
| SRR14240770 | 34.7% | 75.2M |
| SRR14240771 | 29.3% | 54.8M |
| SRR14240772 | 30.6% | 73.7M |
| SRR14240773 | 32.4% | 73.1M |
| SRR14240774 | 35.3% | 26.4M |
| SRR14240775 | 29.3% | 107.8M |
| SRR14240776 | 30.0% | 71.3M |
| SRR14240777 | 29.7% | 64.7M |
| SRR14240778 | 31.7% | 75.9M |
| SRR14240779 | 37.5% | 114.6M |
| SRR14240780 | 33.3% | 101.5M |
| SRR14240781 | 33.5% | 69.5M |
| SRR14240782 | 38.1% | 79.8M |
| SRR14240783 | 30.9% | 64.0M |
| SRR14240784 | 36.5% | 91.9M |
| SRR14240785 | 25.4% | 60.7M |
| SRR14240786 | 38.9% | 99.0M |
| SRR14240787 | 39.7% | 115.5M |
| SRR14240788 | 36.7% | 58.0M |
| SRR14240789 | 24.5% | 83.0M |
| SRR14240790 | 33.5% | 64.0M |
| SRR14240791 | 40.7% | 99.8M |
| SRR14240792 | 30.7% | 55.2M |
| SRR14240793 | 27.2% | 129.0M |
| SRR14240794 | 30.5% | 59.3M |
| SRR14240795 | 37.4% | 102.9M |
| SRR14240796 | 30.5% | 77.0M |
| SRR14240797 | 38.2% | 142.3M |
| SRR14240798 | 42.2% | 94.7M |
featureCounts
Subread featureCounts is a highly efficient general-purpose read summarization program that counts mapped reads for genomic features such as genes, exons, promoter, gene bodies, genomic bins and chromosomal locations.DOI: 10.1093/bioinformatics/btt656.
